Matcha, green tea, and black tea all come from the same plant, Camellia sinensis. What changes their effect on gut bacteria is processing: how much the leaves are oxidized, and in matcha's case, whether you drink the whole ground leaf instead of steeping and discarding it.
The mechanism behind green tea and matcha's more consistent benefit centers on catechins selectively feeding beneficial bacteria like Bifidobacterium and Lactobacillus while suppressing less favorable species, and the resulting fermentation boosts short-chain fatty acid production.[1] Black tea's theaflavins work through a different pathway, and while they carry their own antioxidant benefits, the net effect on gut bacteria balance was less consistently positive across the studies reviewed.
What to do with this
If gut-bacteria support is a specific goal, green tea or matcha have the more consistent research behind them, with matcha delivering a higher total catechin dose per cup since you consume the whole leaf. Two to three cups a day is the range used in most of the supporting research. More than that can bring meaningful caffeine intake, so watch total caffeine across your day if you drink several cups. Your gut bacteria also run on their own daily rhythm, which is part of why when you drink tea can matter alongside how much. Black tea still offers real antioxidant value through theaflavins, so switching entirely isn't necessary, it's a reasonable everyday tea, just with a less consistent gut-bacteria track record than green tea or matcha. If you take your tea sweetened, see how different sugars affect your gut as well, and for another polyphenol-rich snack to pair it with, see walnuts and gut health.